For hotels, you may wish to look at the "most popular"
In particular, I'd recommend the NFalls hotels on the Cdn side and the Toronto hotels closer to Lake Ontario
For transportation, a rental car will give you lots of flexibility. Use public transit within Toronto, but a Toronto car rental to NF and onto Buffalo. Some companies, such as Hertz, offer one way specials online from Toronto airport to Buffalo.
I agree with ABTraveller..... rent a car for the trip to Niagara Falls and Buffalo. It will be a lot easier than public transportation.
Rent the Car, you will be happy you did !!
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